Genes up-regulated by GB under low and high temperature in presence of Salt (0.3M NaCl) Low Tem High Temp Gene Name Gene ID Gene Description C3/C2 SLR C3/C2 SLR List C6/C5 SLR C6/C5 SLR List b0370 orf, hypothetical protein 1.046 C3/C2 1.004 C6/C5 Both ninE b0548 similar to phage 82 and lambda proteins 1.012 C3/C2 1.073 C6/C5 Both b1663 multidrug resistance protein norM (Na(+)drug antiporter) (Multidrug-efflux transporter) 1.311 C3/C2 1.834 C6/C5 Both yeaV b1801 putative transport protein 1.330 C3/C2 1.401 C6/C5 Both IS092 b4434 1.231 C3/C2 1.139 C6/C5 Both b3227 putative transport protein 1.111 C3/C2 1.476 C6/C5 Both yhcN b3238 orf, hypothetical protein 1.509 C3/C2 1.177 C6/C5 Both rdlD b4454 antisense RNA, trans-acting regulator of ldrD translation 1.154 C3/C2 2.580 C6/C5 Both glvC b3683 PTS system, arbutin-like IIC component 1.048 C3/C2 1.023 C6/C5 Both yidX b3696 putative replicase EC 2.7.- 1.050 C3/C2 1.008 C6/C5 Both pstS b3728 high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein 2.910 C3/C2 1.496 C6/C5 Both yjcB b4060 orf, hypothetical protein 1.019 C3/C2 2.168 C6/C5 Both phnC b4106 ATP-binding component of phosphonate transport 1.654 C3/C2 1.305 C6/C5 Both yafX b0248 orf, hypothetical protein 1.042 C3/C2 0.886 Low Temp yagE b0268 putative lyasesynthase 1.741 C3/C2 -0.573 Low Temp ykgL b0295 orf, hypothetical protein 1.013 C3/C2 0.696 Low Temp yahL b0326 orf, hypothetical protein 1.070 C3/C2 0.855 Low Temp glnK b0450 nitrogen regulatory protein P-II 2 1.151 C3/C2 0.908 Low Temp hokE b4415 small toxic membrane polypeptide 1.107 C3/C2 0.869 Low Temp trpD b1263 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transf 1.885 C3/C2 -0.003 Low Temp b1506 orf, hypothetical protein 1.135 C3/C2 0.834 Low Temp b1760 orf, hypothetical protein 1.602 C3/C2 0.498 Low Temp wcaJ b2047 putative colanic acid biosynthsis UDP-glucose lipid carrier transferase 2.062 C3/C2 -0.030 Low Temp yeiE b2157 putative transcriptional regulator LYSR-type 1.112 C3/C2 0.437 Low Temp ais b2252 protein induced by aluminum 1.247 C3/C2 0.617 Low Temp kgtP b2587 alpha-ketoglutarate permease 1.672 C3/C2 0.306 Low Temp yfjZ b2645 orf, hypothetical protein 1.426 C3/C2 0.353 Low Temp b2650 orf, hypothetical protein 1.161 C3/C2 0.747 Low Temp yhaH b3103 putative cytochrome 1.171 C3/C2 0.658 Low Temp agaY b3137 tagatose-bisphosphate aldolase 2 1.191 C3/C2 0.859 Low Temp yhiK b3489 orf, hypothetical protein 1.073 C3/C2 0.944 Low Temp yhjX b3547 putative resistance protein 2.726 C3/C2 0.754 Low Temp t150 b3558 IS150 putative transposase 1.002 C3/C2 0.816 Low Temp uhpT b3666 hexose phosphate transport protein 1.188 C3/C2 0.623 Low Temp yifA b3762 orf, hypothetical protein 1.556 C3/C2 0.674 Low Temp pssR b3763 regulator of pssA 1.189 C3/C2 0.361 Low Temp ilvL b3766 ilvGEDA operon leader peptide 1.351 C3/C2 0.162 Low Temp yigM b3827 orf, hypothetical protein 1.162 C3/C2 0.430 Low Temp mobA b3857 molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar 1.021 C3/C2 0.428 Low Temp b3975 orf, hypothetical protein 1.110 C3/C2 0.665 Low Temp b3995 putative transcriptional regulator 1.626 C3/C2 0.426 Low Temp yjbH b4029 orf, hypothetical protein 1.002 C3/C2 0.506 Low Temp yjbA b4030 orf, hypothetical protein 1.031 C3/C2 0.716 Low Temp yjbM b4048 orf, hypothetical protein 1.111 C3/C2 0.755 Low Temp phnH b4100 phosphonate metabolism 1.022 C3/C2 0.484 Low Temp yjgG b4247 orf, hypothetical protein 1.184 C3/C2 0.895 Low Temp fimB b4312 recombinase involved in phase variation; regulator for fimA 1.504 C3/C2 0.962 Low Temp htgA b0012 positive regulator for sigma 32 heat shock promoters 0.606 1.228 C6/C5 High Temp fixC b0043 flavoprotein; electron transport 0.579 1.022 C6/C5 High Temp yaaU b0045 putative transport protein 0.165 1.244 C6/C5 High Temp aroP b0112 aromatic amino acid transport protein 0.125 1.021 C6/C5 High Temp ecpD b0140 probable pilin chaperone similar to PapD 0.491 1.331 C6/C5 High Temp yafT b0217 putative aminopeptidase 0.450 1.059 C6/C5 High Temp yafV b0219 putative EC 3.5. amidase-type enzyme 0.994 1.088 C6/C5 High Temp fhiA b0229 flagellar biosynthesis 0.115 1.136 C6/C5 High Temp b0235 orf, hypothetical protein 0.678 1.022 C6/C5 High Temp b0245 orf, hypothetical protein 0.473 1.272 C6/C5 High Temp yafW b0246 orf, hypothetical protein 0.468 1.217 C6/C5 High Temp ykfG b0247 putative DNA repair protein 0.698 1.007 C6/C5 High Temp yahC b0317 orf, hypothetical protein 0.780 1.016 C6/C5 High Temp cynX b0341 cyanate transport 0.681 1.030 C6/C5 High Temp b0359 putative transferase 0.585 1.456 C6/C5 High Temp yaiU b0374 putative flagellin structural protein 0.823 1.017 C6/C5 High Temp phoB b0399 positive response regulator for pho regulon, sensor is PhoR (or CreC) 0.910 1.001 C6/C5 High Temp ybaS b0485 putative glutaminase 0.375 1.076 C6/C5 High Temp ybbV b0510 orf, hypothetical protein 0.568 1.301 C6/C5 High Temp b0517 putative malate dehydrogenase 0.511 1.016 C6/C5 High Temp ylbE b0519 orf, hypothetical protein 0.472 1.060 C6/C5 High Temp sfmD b0532 putative outer membrane protein, export function 0.872 1.189 C6/C5 High Temp sfmH b0533 involved in fimbrial asembly 0.343 1.084 C6/C5 High Temp b0539 putative exonuclease 0.613 1.003 C6/C5 High Temp ybcN b0547 orf, hypothetical protein 0.125 1.191 C6/C5 High Temp ybcX b0561 orf, hypothetical protein 0.345 1.003 C6/C5 High Temp pheP b0576 phenylalanine-specific transport system 0.255 1.414 C6/C5 High Temp ybdK b0581 orf, hypothetical protein 0.171 1.029 C6/C5 High Temp fepE b0587 ferric enterobactin (enterochelin) transport 0.963 1.196 C6/C5 High Temp b0612 YbdS 0.580 1.009 C6/C5 High Temp citE b0616 citrate lyase beta chain acyl lyase subunit 0.833 1.276 C6/C5 High Temp ybeQ b0644 orf, hypothetical protein 0.493 1.114 C6/C5 High Temp ybeT b0647 orf, hypothetical protein 0.583 1.066 C6/C5 High Temp ybfH b0691 orf, hypothetical protein 0.554 1.052 C6/C5 High Temp potE b0692 putrescine transport protein 0.552 1.044 C6/C5 High Temp speF b0693 ornithine decarboxylase isozyme, inducible 0.891 1.312 C6/C5 High Temp ybgO b0716 orf, hypothetical protein 0.369 1.131 C6/C5 High Temp ybgP b0717 putative chaperone 0.498 1.139 C6/C5 High Temp hrsA b0731 protein modification enzyme, induction of ompC 0.474 1.007 C6/C5 High Temp ybhD b0768 putative transcriptional regulator LYSR-type 0.315 1.345 C6/C5 High Temp ybhH b0769 orf, hypothetical protein 0.870 1.401 C6/C5 High Temp ybhI b0770 putative membrane pump protein 0.231 1.232 C6/C5 High Temp ybhP b0790 orf, hypothetical protein -0.263 1.044 C6/C5 High Temp ybiA b0798 orf, hypothetical protein 0.637 2.028 C6/C5 High Temp sulA b0958 suppressor of lon; inhibits cell division and ftsZ ring formation 0.520 1.677 C6/C5 High Temp cspH b0989 cold shock-like protein 0.365 1.088 C6/C5 High Temp dinI b1061 damage-inducible protein I 0.372 1.339 C6/C5 High Temp flgH b1079 flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein -0.709 1.773 C6/C5 High Temp ycfR b1112 orf, hypothetical protein 0.289 1.271 C6/C5 High Temp ymfH b1142 hypothetical protein -0.074 1.063 C6/C5 High Temp ymfR b1150 hypothetical protein -0.054 2.448 C6/C5 High Temp b1153 hypothetical protein -0.077 1.892 C6/C5 High Temp umuD b1183 SOS mutagenesis; error-prone repair; processed to UmuD; forms complex with UmuC 0.430 2.046 C6/C5 High Temp umuC b1184 SOS mutagenesis and repair 0.175 1.688 C6/C5 High Temp racC b1351 RacC protein 0.425 1.054 C6/C5 High Temp b1599 possible chaperone 0.193 1.068 C6/C5 High Temp b1600 possible chaperone -0.014 1.234 C6/C5 High Temp b1728 orf, hypothetical protein 0.221 1.332 C6/C5 High Temp b1741 putative excinuclease subunit 0.010 1.083 C6/C5 High Temp b1934 orf, hypothetical protein 0.460 1.014 C6/C5 High Temp dsrB b1952 orf, hypothetical protein 0.908 1.169 C6/C5 High Temp yeeE b2013 putative transport system permease protein -0.190 1.148 C6/C5 High Temp wcaF b2054 putative transferase 0.373 1.939 C6/C5 High Temp b2072 orf, hypothetical protein 0.411 1.195 C6/C5 High Temp gatZ b2095 putative tagatose 6-phosphate kinase 1 0.280 1.014 C6/C5 High Temp yohJ b2141 orf, hypothetical protein 0.689 1.075 C6/C5 High Temp b2191 orf, hypothetical protein 0.533 1.187 C6/C5 High Temp yojL b2214 orf, hypothetical protein 0.173 1.734 C6/C5 High Temp atoA b2222 acetyl-CoA:acetoacetyl-CoA transferase beta subunit 0.797 1.060 C6/C5 High Temp yfbK b2270 orf, hypothetical protein 0.805 1.076 C6/C5 High Temp yfdL b2355 putative RNA polymerase beta 0.322 1.046 C6/C5 High Temp xapB b2406 xanthosine permease 0.208 1.080 C6/C5 High Temp cysW b2423 sulfate transport system permease W protein -0.370 1.569 C6/C5 High Temp eutI b2458 ethanolamine utilization; homolog of Salmonella acetylbutyryl P transferase 0.522 1.112 C6/C5 High Temp hyfB b2482 hydrogenase 4 membrane subunit 0.274 1.642 C6/C5 High Temp b2596 orf, hypothetical protein 0.365 1.381 C6/C5 High Temp aroF b2601 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible) 0.283 1.019 C6/C5 High Temp recN b2616 protein used in recombination and DNA repair -0.023 1.990 C6/C5 High Temp b2649 orf, hypothetical protein 0.644 1.095 C6/C5 High Temp b2651 orf, hypothetical protein 0.879 2.691 C6/C5 High Temp b2654 orf, hypothetical protein 0.718 1.214 C6/C5 High Temp b2655 orf, hypothetical protein 0.934 1.148 C6/C5 High Temp b2658 orf, hypothetical protein 0.280 1.228 C6/C5 High Temp b2670 orf, hypothetical protein 0.753 2.266 C6/C5 High Temp oraA b2698 regulator, OraA protein 0.586 1.638 C6/C5 High Temp b2710 putative flavodoxin 0.404 2.084 C6/C5 High Temp yqcE b2775 putative transport protein 0.520 1.131 C6/C5 High Temp gudP b2789 putative D-glucarate permease (MFS family) 0.344 1.092 C6/C5 High Temp lysA b2838 diaminopimelate decarboxylase 0.214 1.017 C6/C5 High Temp araE b2841 low-affinity L-arabinose transport system proton symport protein 0.402 1.053 C6/C5 High Temp yqeK b2849 orf, hypothetical protein 0.956 1.098 C6/C5 High Temp b2853 orf, hypothetical protein 0.774 1.170 C6/C5 High Temp b2854 orf, hypothetical protein 0.877 1.029 C6/C5 High Temp b2856 orf, hypothetical protein 0.994 1.086 C6/C5 High Temp b2857 orf, hypothetical protein 0.699 1.122 C6/C5 High Temp b2862 orf, hypothetical protein 0.840 1.006 C6/C5 High Temp b2876 orf, hypothetical protein 0.670 1.393 C6/C5 High Temp ygfU b2888 putative permease 0.609 1.110 C6/C5 High Temp b2981 orf, hypothetical protein 0.602 1.238 C6/C5 High Temp b3004 orf, hypothetical protein 0.681 1.025 C6/C5 High Temp ebgA b3076 evolved beta-D-galactosidase, alpha subunit; cryptic gene 0.423 1.407 C6/C5 High Temp ebgC b3077 evolved beta-D-galactosidase, beta subunit; cryptic gene 0.777 1.026 C6/C5 High Temp yhaO b3110 putative transport system permease protein 0.272 1.001 C6/C5 High Temp tdcR b3119 threonine dehydratase operon activator protein 0.754 1.045 C6/C5 High Temp yraH b3142 putative fimbrial-like protein 0.533 1.097 C6/C5 High Temp yhbU b3158 putative collagenase 0.331 1.298 C6/C5 High Temp deaD b3162 inducible ATP-independent RNA helicase -0.132 1.067 C6/C5 High Temp yhcP b3240 orf, hypothetical protein 0.630 1.161 C6/C5 High Temp yhdX b3269 putative transport system permease protein 0.623 1.404 C6/C5 High Temp b3332 putative export protein J 0.562 1.034 C6/C5 High Temp yhfG b3362 orf, hypothetical protein -0.009 1.041 C6/C5 High Temp gntU_2 b3435 low-affinity gluconate transport permease protein, fragment 2 0.618 1.195 C6/C5 High Temp yhhY b3441 orf, hypothetical protein 0.708 1.221 C6/C5 High Temp yrhB b3446 orf, hypothetical protein 0.593 1.084 C6/C5 High Temp zntA b3469 zinc-transporting ATPase 0.527 1.122 C6/C5 High Temp ldrD b4453 small toxic polypeptide 0.794 1.022 C6/C5 High Temp yiaG b3555 orf, hypothetical protein 0.176 1.085 C6/C5 High Temp yiaM b3577 orf, hypothetical protein 0.801 1.165 C6/C5 High Temp dinD b3645 DNA-damage-inducible protein 0.358 1.281 C6/C5 High Temp dgoT b3691 D-galactonate transport 0.906 1.163 C6/C5 High Temp yieI b3716 orf, hypothetical protein 0.641 1.053 C6/C5 High Temp phoU b3724 negative regulator for pho regulon and putative enzyme in phosphate metabolism -0.071 1.041 C6/C5 High Temp pstB b3725 ATP-binding component of high-affinity phosphate-specific transport system -0.342 1.150 C6/C5 High Temp pstA b3726 high-affinity phosphate-specific transport system -0.048 1.721 C6/C5 High Temp sbp b3917 periplasmic sulfate-binding protein -0.239 1.019 C6/C5 High Temp oxyS b4458 global regulatory RNA OxyS 0.844 1.430 C6/C5 High Temp yjbI b4038 orf, hypothetical protein 0.930 1.023 C6/C5 High Temp lexA b4043 regulator for SOS(lexA) regulon 0.196 1.037 C6/C5 High Temp soxS b4062 regulation of superoxide response regulon 0.504 1.113 C6/C5 High Temp yjcF b4066 orf, hypothetical protein 0.767 1.025 C6/C5 High Temp yjcQ b4081 putative enzyme 0.609 1.276 C6/C5 High Temp phnF b4102 putative transcriptional regulator 0.664 1.134 C6/C5 High Temp yjfF b4231 putative transport system permease protein 0.370 1.061 C6/C5 High Temp yjhE b4282 orf, hypothetical protein 0.699 1.065 C6/C5 High Temp yjhR b4308 putative frameshift suppressor 0.737 1.044 C6/C5 High Temp yjiD b4326 orf, hypothetical protein 0.659 1.522 C6/C5 High Temp yjiP b4338 orf, hypothetical protein 0.660 1.062 C6/C5 High Temp yjiY b4354 putative carbon starvation protein -0.967 1.779 C6/C5 High Temp