V. Shankar, M.J. Hamilton, A. Khoruts, A. Kilburn, T. Unno, O. Paliy, and M.J. Sadowsky

Species and genus level resolution analysis of gut microbiota in Clostridium difficile patients following fecal microbiota transplantation (2014) Microbiome, 2:13.

Full text (pdf)

Supplementary material:

• Supplementary table S1 (pdf): Primer sequences and barcodes used for Illumina-based sequencing.


• Supplementary table S2 (pdf): Cumulative number of Illumina reads and assigned OTUs per sample.


• Supplementary table S3 (pdf): Class level abundances among all profiled samples.


• Supplementary table S4 (pdf): Genus level abundances among all profiled samples.


• Supplementary table S5 (pdf): Presence of ROS detoxifying genes among select genera of human gut microbiota.

• Supplementary figure S1 (png): Expanded Figure 4 showing clsutering of all profiled microbial genera.